get_biofeature_annotations

get_biofeature_annotations

get_biofeature_annotations(compendium = "vespucci", bioFeature_Name_In = NULL)

Arguments

compendium	A string - the selected compendium
bioFeature_Name_In	A character vector with bioFeature names

Value

A data.frame

Examples

get_biofeature_annotations(bioFeature_Name_In = c("VIT_00s0332g00060","VIT_00s0332g00070"))
#>                               annotationId
#> 1 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjgyNTAz
#> 2 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjE4MjU5
#> 3 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjE4MjYw
#> 4 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjMxMTIz
#> 5 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjU5MDQw
#> 6 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjE0ODQ1
#> 7 QmlvRmVhdHVyZUFubm90YXRpb25UeXBlOjU5MDQx
#>                                                                                bioFeatureAnnotation
#> 1        {"@id": "27892", "http://purl.obolibrary.org/obo/NCIT_C44272": [{"@value": "GO_0042777"}]}
#> 2          {"@id": "27892", "http://purl.obolibrary.org/obo/NCIT_C41095": [{"@value": "3.6.3.14"}]}
#> 3       {"@id": "27892", "http://purl.obolibrary.org/obo/NCIT_C41095": [{"@value": "EC:3.6.3.14"}]}
#> 4 {"@id": "27892", "http://purl.obolibrary.org/obo/NCIT_C41095": [{"@value": "VIT_00s0332g00060"}]}
#> 5   {"@id": "27892", "http://purl.obolibrary.org/obo/NCIT_C41095": [{"@value": "Vv00s0332g00060"}]}
#> 6 {"@id": "27893", "http://purl.obolibrary.org/obo/NCIT_C41095": [{"@value": "VIT_00s0332g00070"}]}
#> 7   {"@id": "27893", "http://purl.obolibrary.org/obo/NCIT_C41095": [{"@value": "Vv00s0332g00070"}]}
#>                   bioFeatureId    bioFeatureName
#> 1 QmlvRmVhdHVyZVR5cGU6Mjc4OTI= VIT_00s0332g00060
#> 2 QmlvRmVhdHVyZVR5cGU6Mjc4OTI= VIT_00s0332g00060
#> 3 QmlvRmVhdHVyZVR5cGU6Mjc4OTI= VIT_00s0332g00060
#> 4 QmlvRmVhdHVyZVR5cGU6Mjc4OTI= VIT_00s0332g00060
#> 5 QmlvRmVhdHVyZVR5cGU6Mjc4OTI= VIT_00s0332g00060
#> 6 QmlvRmVhdHVyZVR5cGU6Mjc4OTM= VIT_00s0332g00070
#> 7 QmlvRmVhdHVyZVR5cGU6Mjc4OTM= VIT_00s0332g00070
#>                            description
#> 1 ATP synthase subunit beta (Fragment)
#> 2 ATP synthase subunit beta (Fragment)
#> 3 ATP synthase subunit beta (Fragment)
#> 4 ATP synthase subunit beta (Fragment)
#> 5 ATP synthase subunit beta (Fragment)
#> 6                    VIT_00s0332g00070
#> 7                    VIT_00s0332g00070