Get all available ontologies for the selected compendium

get_ontologies(compendium = "vespucci")

Arguments

compendium	A string - the selected compendium

Value

A data.frame

Examples

get_ontologies()
#>                      id                                name
#> 1  T250b2xvZ3lUeXBlOjE=                          Ncbi taxon
#> 2  T250b2xvZ3lUeXBlOjQ=                       Gene ontology
#> 3  T250b2xvZ3lUeXBlOjU=                         Environment
#> 4  T250b2xvZ3lUeXBlOjY=       Plant experimental conditions
#> 5  T250b2xvZ3lUeXBlOjc=                            Agronomy
#> 6  T250b2xvZ3lUeXBlOjg=                 Phenotype and trait
#> 7  T250b2xvZ3lUeXBlOjk=                         Plant trait
#> 8  T250b2xvZ3lUeXBlOjEw                 Unit of measurement
#> 9  T250b2xvZ3lUeXBlOjEx                       Nci thesaurus
#> 10 T250b2xvZ3lUeXBlOjEy                      Plant ontology
#> 11 T250b2xvZ3lUeXBlOjEz                   Bioassay ontology
#> 12 T250b2xvZ3lUeXBlOjE0                      Bao properties
#> 13 T250b2xvZ3lUeXBlOjE1        Experimental factor ontology
#> 14 T250b2xvZ3lUeXBlOjE2                                Edam
#> 15 T250b2xvZ3lUeXBlOjE5                           Gazetteer
#> 16 T250b2xvZ3lUeXBlOjIx Eichhorn-Lorenz Phenological Stages
#> 17 T250b2xvZ3lUeXBlOjIy                               CHEBI
#> 18 T250b2xvZ3lUeXBlOjIz                             Dbpedia
#> 19 T250b2xvZ3lUeXBlOjI0                                MeSH
#> 20 T250b2xvZ3lUeXBlOjI1                                 OBI
#> 21 T250b2xvZ3lUeXBlOjI2                               MICRO